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Feb 15, 2022

Accounting for Uncertainty in Regional Flow–Ecology Relationships

Publication: Journal of Water Resources Planning and Management
Volume 148, Issue 4

Abstract

Flow–ecology relationships are critical for developing and adaptively managing environmental flows. However, uncertainty often arises from data limitations and an incomplete understanding of the spatial and temporal attributes inherent to each relationship. Accounting for sources of uncertainty is critical given the mounting interest in implementing environmental flows at large scales, often with limited information. We used the South Fork Eel River watershed in northern California as a case study to demonstrate how data gaps and uncertainty in flow–ecology relationships may be better quantified. A rigorous literature review revealed that few flow–ecology relationships related directly to the flow regime, and none spanned the full range of hydrologic or geomorphic variability exhibited across the watershed. Identified data gaps informed several sensitivity analyses within a Bayesian network model which showed that the modeled ecological outcome differed by as much as 50% depending on the type and magnitude of uncertainty. This study presents a general regional framework for quantifying spatial and temporal data gaps that can be applied to other watersheds and information types to improve representation of uncertainty in flow–ecology relationships and to inform environmental flow design.

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Data Availability Statement

The data and code to reproduce the results in this study are compiled in a Hydroshare resource and can be accessed at https://www.hydroshare.org/resource/a731d9971eb44518898ea21e163544be/.

Reproducible Results

Haley Canham (Utah State University) and an anonymous reproducibility reviewer downloaded all data and code and reproduced the results in the figures of this study.

Acknowledgments

This project was supported by the California State Water Resources Control Board, the Utah Water Research Laboratory, and the National Science Foundation under the Climate Adaptation Science Fellowship, Grant No. 1633756. The authors gratefully acknowledge David Rosenberg for his contributions to the conception and methods of this project, and Sarah Null for her contributions to the text that greatly improved this work. The authors also wish to thank the referees and the reproducibility reviewer for their insightful comments and suggestions that improved the clarity of this work.

References

Acreman, M. 2005. “Linking science and decision-making: Features and experience from environmental river flow setting.” Environ. Modell. Software 20 (2): 99–109. https://doi.org/10.1016/j.envsoft.2003.08.019.
Acreman, M. C., I. C. Overton, J. King, P. J. Wood, I. G. Cowx, M. J. Dunbar, E. Kendy, and W. J. Young. 2014. “The changing role of ecohydrological science in guiding environmental flows.” Hydrol. Sci. J. 59 (Apr): 433–450. https://doi.org/10.1080/02626667.2014.886019.
Arthington, A. H., J. G. Kennen, E. D. Stein, and J. A. Webb. 2018. “Recent advances in environmental flows science and water management—Innovation in the Anthropocene.” Freshwater Biol. 63 (8): 1022–1034. https://doi.org/10.1111/fwb.13108.
Asarian, J. E., P. Higgins, and P. Trichilo. 2016. “Stream temperatures in the Eel River Basin 1980–2015: Phase 1: Compilation and preliminary analysis.” Accessed June 19, 2019. https://static1.squarespace.com/static/5c1a8f6f4611a0e6c44eb445/t/5c8708677817f76990e4d3a4/1552353424788/EelTemps_Final_20160417.pdf.
Bonada, N., and V. H. Resh. 2013. “Mediterranean-climate streams and rivers: Geographically separated but ecologically comparable freshwater systems.” Hydrobiologia 719 (Nov): 1–29. https://doi.org/10.1007/s10750-013-1634-2.
Bruckerhoff, L. A., D. R. Leasure, and D. D. Magoulick. 2019. “Flow–ecology relationships are spatially structured and differ among flow regimes.” J. Appl. Ecol. 56 (2): 398–412. https://doi.org/10.1111/1365-2664.13297.
Byrne, C. F., G. B. Pasternack, H. Guillon, B. A. Lane, and S. Sandoval-Solis. 2020. “Reach-scale bankfull channel types can exist independently of catchment hydrology.” Earth Surf. Process. Landf. 45 (9): 2179–2200. https://doi.org/10.1002/esp.4874.
California Department of Fish and Wildlife. 2014. South Fork Eel river watershed assessment. Coastal Watershed Planning and Assessment Program. Sacramento, CA: California Department of Fish and Wildlife.
California Department of Fish and Wildlife. 2016. “Study plan- habitat and instream flow evaluation for Anadromous Salmonids in the South Fork Eel river and tributaries, Humboldt and Mendocino counties.” Accessed February 24, 2019. https://nrm.dfg.ca.gov/FileHandler.ashx?DocumentID=118161.
Castelletti, A., and R. Soncini-Sessa. 2007. “Bayesian Networks and participatory modelling in water resource management.” Environ. Modell. Software 22 (8): 1075–1088. https://doi.org/10.1016/j.envsoft.2006.06.003.
Chan, T. U., B. T. Hart, M. J. Kennard, B. J. Pusey, W. Shenton, M. M. Douglas, E. Valentine, and S. Patel. 2012. “Bayesian network models for environmental flow decision making in the Daly River, Northern Territory, Australia.” River Res. Appl. 28 (3): 283–301. https://doi.org/10.1002/rra.1456.
Chen, S. H., and C. A. Pollino. 2012. “Good practice in Bayesian network modelling.” Environ. Modell. Software 37 (Nov): 134–145. https://doi.org/10.1016/j.envsoft.2012.03.012.
Colloff, M. J., et al.2018. “The use of historical environmental monitoring data to test predictions on cross-scale ecological responses to alterations in river flows.” Aquat. Ecol. 52 (1): 133–153. https://doi.org/10.1007/s10452-018-9650-y.
Cook, R. 1991. Experts in uncertainty: Opinion and subjective probability in science. New York: Oxford University Press.
Courtney, H. 2003. “Decision-driven scenarios for assessing four levels of uncertainty.” Strategy Leadersh. 31 (1): 14–22. https://doi.org/10.1108/10878570310455015.
Csardi, G., and T. Nepusz. 2006. “The Igraph software package for complex network research.” Accessed September 11, 2020. http://igraph.org.
Dralle, D. N., W. J. Hahm, D. M. Rempe, N. J. Karst, S. E. Thompson, and W. E. Dietrich. 2018. “Quantification of the seasonal hillslope water storage that does not drive streamflow.” Hydrol. Process. 32 (13): 1978–1992. https://doi.org/10.1002/hyp.11627.
Gasith, A., and V. H. Resh. 1999. “Streams in Mediterranean climate regions: Abiotic influences and biotic responses to predictable seasonal events.” Ann. Rev. Ecol. Syst. 30 (1): 51–81. https://doi.org/10.1146/annurev.ecolsys.30.1.51.
George, R., R. McManamay, D. Perry, J. Sabo, and B. L. Ruddell. 2021. “Indicators of hydro-ecological alteration for the rivers of the United States.” Ecol. Indic. 120 (May): 106908. https://doi.org/10.1016/j.ecolind.2020.106908.
Greer, G., S. Carlson, and S. Thompson. 2019. “Evaluating definitions of salmonid thermal refugia using in situ measurements in the Eel River, Northern California.” Ecohydrology 12 (5): e2101. https://doi.org/10.1002/eco.2101.
Greet, J., J. A. Webb, and R. D. Cousens. 2011. “The importance of seasonal flow timing for riparian vegetation dynamics: A systematic review using causal criteria analysis.” Freshwater Biol. 56 (Jul): 1231–1247. https://doi.org/10.1111/j.1365-2427.2011.02564.x.
Guillon, H., C. F. Byrne, B. A. Lane, S. Sandoval Solis, and G. B. Pasternack. 2020. “Channel types predictions for the South Fork Eel River basin.” Dataset https://doi.org/10.25338/B8VG83.
Häder, D. P., and P. W. Barnes. 2019. “Comparing the impacts of climate change on the responses and linkages between terrestrial and aquatic ecosystems.” Sci. Total Environ. 682 (Sep): 239–246. https://doi.org/10.1016/j.scitotenv.2019.05.024.
Hahm, W. J., D. M. Rempe, D. N. Dralle, T. E. Dawson, S. M. Lovill, A. B. Bryk, D. L. Bish, J. Schieber, and W. E. Dietrich. 2019. “Lithologically controlled subsurface critical zone thickness and water storage capacity determine regional plant community composition.” Water Resour. Res. 55 (4): 3028–3055. https://doi.org/10.1029/2018WR023760.
Haraldsson, H. V. 2004. “Introduction to system thinking and causal loop diagrams. Reports in ecology and environmental engineering.” Accessed August 21, 2019. https://www.researchgate.net/publication/258261003_Introduction_to_system_thinking_and_causal_loop_diagrams.
Hart, B. T., and C. A. Pollino. 2009. “Bayesian modelling for risk-based environmental water allocation.” Accessed November 18, 2019. https://www.waterboards.ca.gov/waterrights/water_issues/programs/bay_delta/deltaflow/docs/exhibits/swrcb/swrcb_hart2009.pdf.
Higgins, P. 2013. “Eel River recovery project: 2013 Water temperature and flow monitoring report.” Accessed June 21, 2019. https://static1.squarespace.com/static/5c1a8f6f4611a0e6c44eb445/t/5c870925652dea6d756dd51f/1552353583614/ERRP_Temp_Flow_Final_08_25_14.pdf.
Holmes, R., C. Matthaei, R. Gabrielsson, G. Closs, and J. Hayes. 2018. “A decision support system to diagnose factors limiting stream trout fisheries.” River Res. Appl. 34 (7): 816–823. https://doi.org/10.1002/rra.3292.
Horne, A. C., R. Nathan, N. L. Poff, N. R. Bond, J. A. Webb, J. Wang, and A. John. 2019. “Modeling flow–ecology responses in the Anthropocene: Challenges for sustainable riverine management.” Bioscience 69 (10): 789–799. https://doi.org/10.1093/biosci/biz087.
Horne, A. C., J. M. Szemis, J. A. Webb, S. Kaur, M. J. Stewardson, N. Bond, and R. Nathan. 2018. “Informing environmental water management decisions: Using conditional probability networks to address the information needs of planning and implementation cycles.” Environ. Manage. 61 (3): 347–357. https://doi.org/10.1007/s00267-017-0874-8.
Horne, A. C., J. A. Webb, M. J. Stewardson, B. Richter, and M. Acreman. 2017. Water for the environment. Cambridge, MA: Academic Press.
Jalali, S., and C. Wohlin. 2012. “Systematic literature studies: Database searches vs. backward snowballing.” In Proc., Int. Symp. on Empirical Software Engineering and Measurement, 29–38. New York: Association for Computing Machinery. https://doi.org/10.1145/2372251.2372257.
Kelson, S. J., and S. M. Carlson. 2019. “Do precipitation extremes drive growth and migration timing of a Pacific salmonid fish in Mediterranean-climate streams?” Ecosphere 10 (3): e02618. https://doi.org/10.1002/ecs2.2618.
Leigh, C., B. Stewart-Koster, F. Sheldon, and M. A. Burford. 2012. “Understanding multiple ecological responses to anthropogenic disturbance: Rivers and potential flow regime change.” Ecol. Appl. 22 (1): 250–263. https://doi.org/10.1890/11-0963.1.
Lynch, D. T., D. R. Leasure, and D. D. Magoulick. 2018. “The influence of drought on flow-ecology relationships in Ozark Highland streams.” Freshwater Biol. 63 (Aug): 946–968. https://doi.org/10.1111/fwb.13089.
Marchau, V. A. W. J., W. E. Walker, P. J. T. M. Bloemen, and S. W. Popper. 2019. Decision making under deep uncertainty, 1–20. Berlin: Springer.
Marks, J. C., M. E. Power, and M. S. Parker. 2000. “Flood disturbance, algal productivity, and interannual variation in food chain length.” Oikos 90 (1): 20–27. https://doi.org/10.1034/j.1600-0706.2000.900103.x.
Mierau, D. W., W. J. Trush, G. J. Rossi, J. K. Carah, M. O. Clifford, and J. K. Howard. 2018. “Managing diversions in unregulated streams using a modified percent-of-flow approach.” Freshwater Biol. 63 (Aug): 752–768. https://doi.org/10.1111/fwb.12985.
Miller, K. A., R. Casas-Mulet, S. C. de Little, M. J. Stewardson, W. M. Koster, and J. A. Webb. 2018. “Deficiencies in our understanding of the hydro-ecology of several native Australian fish: A rapid evidence synthesis.” Mar. Freshwater Res. 69 (8): 1208–1221. https://doi.org/10.1071/MF17241.
Miller, K. A., J. A. Webb, S. C. de Little, and M. J. Stewardson. 2013. “Environmental flows can reduce the encroachment of terrestrial vegetation into river channels: A systematic literature. Review.” Environ. Manage. 52 (5): 1202–1212. https://doi.org/10.1007/s00267-013-0147-0.
Moyle, P. B., R. A. Lusardi, P. J. Samuel, and J. V. E. Katz. 2017. State of the Salmonids : Status of California’s emblematic fishes. Davis, CA: Univ. of California.
Norris, R. H., J. A. Webb, S. J. Nichols, M. J. Stewardson, and E. T. Harrison. 2012. “Analyzing cause and effect in environmental assessments: Using weighted evidence from the literature.” Freshwater Sci. 31 (Mar): 5–21. https://doi.org/10.1899/11-027.1.
Null, S. E., and J. H. Viers. 2013. “In bad waters: Water year classification in nonstationary climates.” Water Resour. Res. 49 (2): 1137–1148. https://doi.org/10.1002/wrcr.20097.
Poff, L. 2018. “Beyond the natural flow regime? Broadening the hydro-ecological foundation to meet environmental flows challenges in a non-stationary world.” Freshwater Biol. 63 (8): 1011–1021. https://doi.org/10.1111/fwb.13038.
Poff, N. L., D. Allan, M. Bain, J. Karr, K. Prestegaard, B. Richter, R. E. Sparks, and J. Stromberg. 1997. “The natural flow regime.” Bioscience 47 (Dec): 769–784. https://doi.org/10.2307/1313099.
Poff, N. L., and J. K. H. Zimmerman. 2010. “Ecological responses to altered flow regimes: A literature review to inform the science and management of environmental flows.” Freshwater Biol. 55 (Jan): 194–205. https://doi.org/10.1111/j.1365-2427.2009.02272.x.
Power, M. E., M. S. Parker, and W. E. Dietrich. 2008. “Seasonal reassembly of a river food web: Floods, droughts, and impacts of fish.” Ecol. Monogr. 78 (2): 263–282. https://doi.org/10.1890/06-0902.1.
Pullin, A. S., T. M. Knight, D. A. Stone, and K. Charman. 2004. “Do conservation managers use scientific evidence to support their decision-making?” Biol. Conserv. 119 (2): 245–252. https://doi.org/10.1016/j.biocon.2003.11.007.
Rheinheimer, D. E., S. E. Null, and J. H. Viers. 2016. “Climate-adaptive water year typing for instream flow requirements in California’s Sierra Nevada.” J. Water Resour. Plann. Manage. 142 (11): 04016049. https://doi.org/10.1061/(ASCE)WR.1943-5452.0000693.
Risley, J., A. Stonewall, and T. Haluska. 2008. Estimating flow-duration and low-flow frequency statistics for unregulated streams in Oregon. Washington, DC: USGS.
Schaaf, C. J., S. J. Kelson, S. C. Nusslé, and S. M. Carlson. 2017. “Black spot infection in juvenile steelhead trout increases with stream temperature in northern California.” Environ. Biol. Fishes 100 (6): 733–744. https://doi.org/10.1007/s10641-017-0599-9.
Scutari, M. 2010. “Learning Bayesian networks with the bnlearn R Package.” J. Stat. Software 35 (3): 1–22. https://doi.org/10.18637/jss.v035.i03.
Shenton, W., B. T. Hart, and T. Chan. 2011. “Bayesian network models for environmental flow decision-making: 1. Latrobe River Australia.” River Res. Appl. 27 (3): 283–296. https://doi.org/10.1002/rra.1348.
Stagge, J. H., D. E. Rosenberg, A. M. Abdallah, H. Akbar, N. A. Attallah, and R. James. 2019. “Assessing data availability and research reproducibility in hydrology and water resources.” Sci. Data 6 (Feb): 1–2. https://doi.org/10.1038/sdata.2019.30.
State Water Resources Control Board. 2019. “Cannabis cultivation policy principles and guidelines for cannabis cultivation.” Accessed January 18, 2020. https://www.waterboards.ca.gov/water_issues/programs/cannabis/docs/policy/final_cannabis_policy_with_attach_a.pdf.
Stewart-Koster, B., S. E. Bunn, S. J. MacKay, N. L. Poff, R. J. Naiman, and P. S. Lake. 2010. “The use of Bayesian networks to guide investments in flow and catchment restoration for impaired river ecosystems.” Freshwater Biol. 55 (1): 243–260. https://doi.org/10.1111/j.1365-2427.2009.02219.x.
Suttle, K. B., M. E. Power, J. M. Levine, and C. McNeely. 2004. “How fine sediment in riverbeds impairs growth and survival of juvenile salmonids.” Ecol. Appl. 14 (4): 969–974. https://doi.org/10.1890/03-5190.
Tattam, I. A., H. W. Li, G. R. Giannico, and J. R. Ruzycki. 2017. “Seasonal changes in spatial patterns of Oncorhynchus mykiss growth require year-round monitoring.” Ecol. Freshwater Fish 26 (3): 434–443. https://doi.org/10.1111/eff.12287.
Tessman, S. A. 1979. “Environmental assessment. Technical appendix E.” In ‘Reconnaissance elements’ of The Western Dakotas region of South Dakota study. Brookings, SD: South Dakota State Univ.
Tharme, R. E. 2003. “A global perspective on environmental flow assessment: Emerging trends in the development and application of environmental flow methodologies for rivers.” River Res. Appl. 19 (5–6): 397–441. https://doi.org/10.1002/rra.736.
Tickner, D., et al.2020. “Bending the curve of global freshwater biodiversity loss: An emergency recovery plan.” Bioscience 70 (4): 330–342. https://doi.org/10.1093/biosci/biaa002.
Tonkin, J. D., N. L. Poff, N. R. Bond, A. Horne, D. M. Merritt, L. V. Reynolds, J. D. Olden, A. Ruhl, and D. A. Lytle. 2019. “Prepare river ecosystems for an uncertain future.” Nature 570 (7761): 301–303. https://doi.org/10.1038/d41586-019-01877-1.
Uusitalo, L. 2007. “Advantages and challenges of Bayesian networks in environmental modelling.” Ecol. Modell. 203 (3–4): 312–318. https://doi.org/10.1016/j.ecolmodel.2006.11.033.
Walker, W. E., P. Harremoës, J. Rotmans, J. P. van der Sluijs, M. B. A. van Asselt, P. Janssen, and M. P. Krayer von Krauss. 2003. “Defining uncertainty: A conceptual basis for uncertainty management in model-based decision support.” Integr. Assess. 4 (1): 5–17. https://doi.org/10.1076/iaij.4.1.5.16466.
Walters, A. W. 2016. “The importance of context dependence for understanding the effects of low-flow events on fish.” Freshwater Sci. 35 (1): 216–228. https://doi.org/10.1086/683831.
Wang, J., D. E. Rosenberg, K. G. Wheeler, and J. C. Schmidt. 2020a. “Managing the Colorado River for an uncertain future.” Accessed October 25, 2020. https://qcnr.usu.edu/coloradoriver/files/CCRS_White_Paper_3.pdf.
Wang, T., S. J. Kelson, G. Greer, S. E. Thompson, and S. M. Carlson. 2020b. “Tributary confluences are dynamic thermal refuges for a juvenile salmonid in a warming river network.” River Res. Appl. 36 (Sep): 1076–1086. https://doi.org/10.1002/rra.3634.
Webb, J. A., S. J. Nichols, R. H. Norris, M. J. Stewardson, S. R. Wealands, and P. Lea. 2012. “Ecological responses to flow alteration: Assessing causal relationships with eco evidence.” Wetlands 32 (Apr): 203–213. https://doi.org/10.1007/s13157-011-0249-5.
Wheeler, K., S. J. Wenger, and M. C. Freeman. 2018. “States and rates: Complementary approaches to developing flow-ecology relationships.” Freshwater Biol. 63 (Aug): 906–916. https://doi.org/10.1111/fwb.13001.
Williams, J. G., P. B. Moyle, J. A. Webb, and G. M. Kondolf. 2019. Environmental flow assessment: Methods and applications. Hoboken, NJ: Wiley.
Yarnell, S. M., E. D. Stein, J. A. Webb, T. Grantham, R. A. Lusardi, J. Zimmerman, R. A. Peek, B. A. Lane, J. Howard, and S. Sandoval-Solis. 2020. “A functional flows approach to selecting ecologically relevant flow metrics for environmental flow applications.” River Res. Appl. 36 (2): 318–324. https://doi.org/10.1002/rra.3575.

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Go to Journal of Water Resources Planning and Management
Journal of Water Resources Planning and Management
Volume 148Issue 4April 2022

History

Received: Mar 16, 2021
Accepted: Dec 9, 2021
Published online: Feb 15, 2022
Published in print: Apr 1, 2022
Discussion open until: Jul 15, 2022

Authors

Affiliations

Graduate Researcher, Dept. of Civil and Environmental Engineering, Utah State Univ., Logan, UT 84322. ORCID: https://orcid.org/0000-0002-6429-0727
Assistant Professor, Dept. of Civil and Environmental Engineering, Utah State Univ., Logan, UT 84322 (corresponding author). ORCID: https://orcid.org/0000-0003-2331-7038. Email: [email protected]

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