Methodology for Analyzing Dissolved Oxygen Consumption in Benthic Chambers
Publication: Journal of Environmental Engineering
Volume 141, Issue 7
Abstract
Dissolved oxygen (DO) consumption in the sediments of natural aquatic ecosystems occurs by mass flux across the water-sediment interface. This mass flux is determined as either the rate of oxygen consumption in the sediment or the rate of DO diffusion across the diffusive sublayer. The thickness of the diffusive sublayer is determined by the flow conditions in the turbulent water column. Consequently, feedback occurs between the biochemical consumption that occurs in the sediment and the flow that occurs in the water column. Together, these conditions define the DO flux across the water-sediment interface. Benthic chambers have been used to measure this flux in field and experimental conditions. However, these measurements do not account either for the fact that the flow inside a benthic chamber is not representative of field conditions or for the DO consumption in the water column. Thus, they can provide an inaccurate estimation of the sediment DO demanded in the field. This article aims to present and discuss an approach for analyzing a time series of DO depletion inside a benthic chamber. Based on this approach, the processes related to turbulent water transport in the column are separated from the processes that characterize biochemical consumption in the sediments and the water column. Under these conditions, the parameters related to biochemical consumption in the sediments can be used to compute the expected DO demanded of the sediments in field conditions. Sediment samples from a lagoon near the Universidad de Chile campus in Santiago, the capital city of Chile, were used to illustrate the application of the proposed method. In addition, dimensionless numbers were used to define the method’s validity and limitations.
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Acknowledgments
This article was financed by the project Iniciación Fondecyt no. 11100306 and project Fondecyt Regular no. 1140821. In addition, the author wishes to thank the reviewers of this article for their constructive comments, Rodrigo Pérez and María del Mar Bustos for conducting the experiments, and Carolina Meruane for providing useful comments on an early version of the manuscript.
References
Arega, F., and Lee, J. (2005). “Diffusional mass transfer at sediment-water interface of cylindrical sediment oxygen demand chamber.” J. Environ. Eng., 755–766.
Berg, P., et al. (2003). “Oxygen uptake by aquatic sediments measured with a novel non-invasive eddy-correlation technique.” Mar. Ecol. Prog. Ser., 261, 75–83.
Berg, P., Risgaard-Petersen, N., and Rysgaard, S. (1998). “Interpretation of measured concentration profiles in sediment pore water.” Limnol. Oceanogr. 43(7), 1500–1510.
Bouldin, D. R. (1968). “Methods for describing the diffusion of oxygen and other mobile constituents across the mud-water interface.” J. Ecol., 56(1), 77–87.
Bryant, L., McGinnis, D., Larrai, C., Brand, A., Little, J., and Wüest, A. (2010). “Evaluating oxygen fluxes using microprofiles from both sides of the sediment-water interface.” Limnol. Oceanogr. Methods, 8, 610–627.
Cole, T. M., and Buchak, E. M. (1995). CE-QUAL-W2: A two-dimensional, laterally averaged, hydrodynamic and water quality model, version 2.0. user manual, U.S. Army Corps of Engineers.
Dade, W. B. (1993). “Near-bed turbulence and hydrodynamic control of diffusional mass transfer at the sea floor.” Limnol. Oceanogr., 38(1), 52–69.
Dade, W. B., Hogg, A. J., and Boudreau, B. P. (2001). “Physics of flow above the sediment-water interface.” Fluid mechanics of environmental interfaces, C. Gualtieri and D. T. Mihailovic, eds., Oxford University Press, New York, 4–43.
de la Fuente, A. (2014). “Heat and dissolved oxygen exchanges between the sediment and water column in a shallow salty lagoon.” J. Geophys. Res. Biogeosci., 119(4), 596–613.
Ferrón, S., et al. (2008). “Hydrodynamic characterization and performance of an autonomous benthic chamber for use in coastal systems.” Limnol. Oceanogr. Methods, 6, 558–571.
Gao, K., Xu, J., Zheng, Y., and Ke, C. (2012). “Measurement of benthic photosynthesis and calcification in flowing-through seawater with stable carbonate chemistry.” Limnol. Oceanogr. Methods, 10, 555–559.
Gin, K., and Gopalakrishnan, A. (2010). “Sediment oxygen demand and nutrient fluxes for a tropical reservoir in Singapore.” J. Environ. Eng., 78–85.
Glud, R., Berg, P., Fossing, H., and Jørgensen, B. B. (2007). “Effect of the diffusive boundary layer on benthic mineralization and O2 distribution: A theoretical model analysis.” Limnol. Oceanogr., 52(2), 547–557.
Guatieri, C., and Gualtieri, P. D. (2008). “Gas-transfer at unsheared free-surface.” Fluid mechanics of environmental interfaces, C. Gualtieri and D. T. Mihailovic, eds., Oxford University Press, New York, 131–160.
Hall, P., Anderson, L., Rutgers, M., Sundby, B., and Westerlund, S. (1989). “Oxygen uptake kinetics in the benthic boundary layer.” Limnol. Oceanogr., 34(4), 734–746.
Herzfeld, M., Hamilton, D. P., and Douglas, G. B. (2001). “Comparison of a mechanistic sediment model and a water column for hindcasting oxygen decay in benthic chambers.” Ecol. Modell., 136(2–3), 255–267.
Hipsey, M. R., Antenucci, J. P., and Hamilton, D. P. (2014). “Computational aquatic ecosystem dynamic model: CAEDYM v3. V3.2 science manual.” Centre for Water Research Rep., Centre for Water Research, Univ. of Western Australia. Perth, Australia.
Hondzo, M., Feyaerts, T., Donovan, R., and O’Connor, B. L. (2005). “Universal scaling of dissolved oxygen distribution at the sediment-water interface: A power law.” Limnol. Oceanogr., 50(5), 1667–1676.
Inoue, T., and Nakamura, Y. (2011). “Effects of hydrodynamic conditions on DO transfer at a rough sediment surface.” J. Environ. Eng., 28–37.
Jahnke, R. A., Nelson, J. R., Richards, M. E., Robertson, C. Y., Rao, A. M. F., and Jahnke, D. B. (2008). “Benthic primary productivity on the Georgia midcontinental shelf: Benthic flux measurements and high-resolution, continuous in situ PAR records.” J. Geophys. Res., 113(C8), 1–13.
Jørgensen, B., and Revsbech, N. (1985). “Diffusive boundary layers and the oxygen uptake of sediment and detritus.” Limnol. Oceanogr., 30(1), 111–122.
Jørgensen, B. B., and Des Marais, J. (1990). “The diffusive boundary layer of sediments: Oxygen microgradients over a microbial mat.” Limnol. Oceanogr., 35(6), 1343–1355.
Jørgensen, B. B., and Gundersen, J. K. (1990). “Microstructure of diffusive boundary layers and the oxygen uptake of the sea floor.” Nature, 345(6276), 604–607.
Jørgensen, B. B., Revsbech, N. P., and Cohen, Y. (1983). “Photosynthesis and structure of benthic microbial mats: Microelectrode and SEM studies of four cyaniubacterial communities.” Limnol. Oceanogr., 28(6), 1075–1093.
Jørgensen, S., and Bendoricchio, G. (2001). Fundamentals of ecological modeling, Elsevier Science and Technology, Oxford, U.K.
Kemp, P., Cole, J., Sherr, B., and Sherr, E. (1993). Handbook of methods in aquatic microbial ecology, CRC Press, FL.
Kühl, M., and Jørgensen, B. B. (1992). “Microsensor measurements of sulfate reduction and sulfide oxidation in compact microbial communities of aerobic biofilms.” Appl. Environ. Microbiol., 58(4), 1164–1174.
Mackenthun, A., and Stefan, H. G. (1998). “Effect of flow velocity on sediment oxygen demand: Experiments.” J. Environ. Eng., 222–230.
Nakamura, Y., and Stefan, H. G. (1994). “Effect of flow velocity on sediment oxygen demand: Theory.” J. Environ. Eng., 996–1016.
O’Connor, B. L., and Hondzo, M. (2008). “Dissolved oxygen transfer to sediments by sweep and eject motion in aquatic environments.” Limnol. Oceanogr., 53(2), 566–578.
Odum, H. T. (1956). “Primary production in flowing waters.” Limnol. Oceanogr., 1(2), 102–117.
Ordoñez, C., Pérez, R., and de la Fuente, A. (2013). “Experimental study of flow and diffusional mass transfer coefficient across the water-sediment interface determined by wind blowing an extremely shallow lagoon.” 35th IAHR World Congress, International Association of Hydroenvironmental Research, Chengdu, China.
Rasmussen, H., and Jørgensen, B. B. (1992). “Microelectrode study of seasonal oxygen uptake in a coastal sediment: Role of molecular diffusion.” Mar. Ecol. Prog. Ser., 81(3), 289–303.
Revsbech, R. P., Jørgensen, B. B., and Blackburn, T. H. (1980a). “Oxygen in the sea bottom measured with a microelectrode.” Science, 207(4437), 1355–1356.
Revsbech, R. P., Sorensen, J., Blackburn, T. H., and Lomholt, J. P. (1980b). “Distribution of oxygen in marine sediments measured with microelectrodes.” Limnol. Oceanogr., 25(3), 403–411.
Roy, H., Huettel, M., and Jørgensen, B. B. (2005). “The influence of topography on the functional exchange surface of marine soft sediments, assessed from sediment topography measured in situ.” Limnol. Oceanogr., 50(1), 106–112.
Ryther, J. H. (1956). “The measurement of primary production.” Limnol. Oceanogr., 1(2), 72–84.
Santschi, P. H., Bower, P., Nyffeler, U. P., Azevedo, A., and Broecker, W. S. (1983). “Estimates of the resistance to chemical transport posed by the deep-sea boundary layer.” Limnol. Oceanogr., 28(5), 899–912.
Seber, G., and Wild, C. (2003). Nonlinear regression, Wiley, New York.
Sommer, S., Türk, M., Kriwanek, S., and Pfannkuche, O. (2008). “Gas exchange system for extended in situ benthic chamber flux measurements under controlled oxygen conditions: First application–sea bed methane emission measurements at Captain Arutyunov mud volcano.” Limnol. Oceanogr. Methods, 6, 23–33.
Steinberger, N., and Hondzo, M. (1999). “Diffusional mass transfer at sediment-water interface.” J. Environ. Eng., 192–200.
Tengberg, A., Stahl, H., Müller, V., Arning, U., Andersson, H., and Hall, P. O. J. (2004). “Intercalibration of benthic flux chamber: I. Accuracy of flux measurements and influence of chamber hydrodynamics.” Prog. Oceanogr., 60(1), 1–28.
Viollier, E., et al. (2003). “Benthic biogeochemistry: State of the art technologies and guidelines for the future of in situ survey.” J. Exp. Mar. Biol. Ecol., 285–286, 5–31.
Wetzel, R. (2001). Limnology, 3rd Ed., Academic Press, San Diego.
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Published In
Journal of Environmental Engineering
Volume 141 • Issue 7 • July 2015
Copyright
© 2014 American Society of Civil Engineers.
History
Received: Jan 21, 2014
Accepted: Nov 18, 2014
Published online: Dec 24, 2014
Discussion open until: May 24, 2015
Published in print: Jul 1, 2015
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