Abstract

Enhanced biological phosphorous removal (EBPR) from wastewater has been successfully used for more than three decades and is considered to be an environmentally friendly wastewater-treatment process. Biologically, this process is realized by incorporation of phosphate as polyphosphate (polyP) granules in activated sludge bacteria. Important groups of bacteria responsible for P removal have been identified, but the full microbial diversity involved in this process is still unknown. This paper reports on the microbial composition of activated sludge communities in eight wastewater-treatment plants (WWTPs) with different sizes and modes of operation. The polyphosphate accumulating organisms (PAOs) within this complex biocenosis were identified by fluorescent dye staining and classified by in situ hybridization techniques. Of the bacteria in the aerobic basin, 5–13% contained polyP granules. In addition, flow cytometry was used to quantify PAOs after tetracycline staining and to separate these cells. The phylogenetic affiliation of the sorted PAOs was identified by cloning and sequencing. Both workflows showed similar outcomes. The majority of PAOs in all plants were Betaproteobacteria (22%), Actinobacteria (21%), and Alphaproteobacteria (12%), with differences in the relative abundance. In addition, Bacteroidetes (12%) were detected in the clone libraries, especially Haliscomenobacter, which should be considered further with regard to its influence on the EBPR process. The denaturing gradient gel electrophoresis analyses of sorted PAOs revealed a diverse community composition of Betaproteobacteria, Actinobacteria, and Rhodocyclales in the WWTPs. PAOs were present in EBPR and non-EBPR WWTPs, and no correlation in their abundance and phylogenetic composition to the mode of operation was revealed. This study shows that specific PAO communities existed in the various WWTPs, probably favored by the respective wastewater composition, including so far unvalued PAOs species, but their active contribution in the EBPR process remains to be investigated.

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Acknowledgments

This study was supported by the scholarship program of the German Federal Environmental Foundation (DBU), Osnabrück, Germany (AZ 20007/901), and the German Federal Ministry of Education Research and Technology (BMBF), Bonn, Germany (Project No.02-WA0700). We thank Zweckverband Kommunale Wasserversorgung/Abwasserentsorgung “Mittleres Erzgebirgsvorland” Hainichen for providing data of the wastewater composition and design of the plants FB, NW, MW, and HN.

References

Albertsen, M., Hansen, L. B. S., Saunders, A. M., Nielsen, P. H., and Nielsen, K. L. (2011). “A metagenome of a full-scale microbial community carrying out enhanced biological phosphorus removal.” ISME J., 6(6), 1094–1106.
Amann, R. I., Binder, B. J., Olson, R. J., Chisholm, S. W., Devereux, R., and Stahl, D. A. (1990). “Combination of 16S rRNA-targeted oligonucleotide probes with flow cytometry for analyzing mixed microbial populations.” Appl. Environ. Microbiol., 56(6), 1919–1925.
Amann, R. I., Ludwig, W., and Schleifer, K. H. (1995). “Phylogenetic identification and in situ detection of individual microbial cells without cultivation.” Microbiol. Rev., 59(1), 143–169.
Amann, R. I., Snaidr, J., Wagner, M., Ludwig, W., and Schleifer, K. H. (1996). “In situ visualization of high genetic diversity in a natural microbial community.” J. Bacteriol., 178(12), 3496–3500.
Beer, M., Kong, Y. H., and Seviour, R. J. (2004). “Are some putative glycogen accumulating organisms (GAO) in anaerobic: Aerobic activated sludge systems members of the alpha-Proteobacteria?” Microbiology, 150(7), 2267–2275.
Beer, M., Stratton, H. M., Griffiths, P. C., and Seviour, R. J. (2006). “Which are the polyphosphate accumulating organisms in full-scale activated sludge enhanced biological phosphate removal systems in Australia?” J. Appl. Microbiol., 100(2), 233–243.
Brown, M. R., and Kornberg, A. (2004). “Inorganic polyphosphate in the origin and survival of species.” Proc. Natl. Acad. Sci., 101(46), 16085–16087.
Cox, T. F., and Cox, M. A. A. (1994). Multidimensional scaling, Chapman & Hall, London.
Crocetti, G. R., et al. (2000). “Identification of polyphosphate-accumulating organisms and design of 16S rRNA-directed probes for their detection and quantitation.” Appl. Environ. Microbiol., 66(3), 1175–1182.
Dabert, P., Sialve, B., Delgenès, J. P., Moletta, R., and Godon, J. J. (2001). “Characterisation of the microbial 16S rDNA diversity of an aerobic phosphorus-removal ecosystem and monitoring of its transition to nitrate respiration.” Appl Microbiol Biotechnol., 55(4), 500–509.
Daims, H., Bruhl, A., Amann, R., Schleifer, K. H., and Wagner, M. (1999). “The domain-specific probe EUB338 is insufficient for the detection of all Bacteria: development and evaluation of a more comprehensive probe set.” Syst. Appl. Microbiol., 22(3), 434–444.
Deinema, M. H., van Loosdrecht, M., and Scholten, A. (1985). “Some physiological characteristics of Acinetobacter spp. accumulating large amounts of phosphate.” Wat. Sci. Tech., 17(11–12), 119–125.
Elser, J., and Bennett, E. (2011). “Phosphorus cycle: A broken biogeochemical cycle.” Nature, 478(7367), 29–31.
Eschenhagen, M., Schuppler, M., and Röske, I. (2003). “Molecular characterization of the microbial community structure in two activated sludge systems for the advanced treatment of domestic effluents.” Water Res., 37(13), 3224–3232.
Felsenstein, J. (1985). “Confidence limits on phylogenies: An approach using the bootstrap.” Evolution, 39(4), 783–791.
Gloess, S., Grossart, H. P., Allgaier, M., Ratering, S., and Hupfer, M. (2008). “Use of laser microdissection for phylogenetic characterization of polyphosphate-accumulating bacteria.” Appl. Environ. Microbiol., 74(13), 4231–4235.
Günther, S., et al. (2008). “Fixation procedures for flow cytometric analysis of environmental bacteria.” J. Microbiol. Methods, 75(1), 127–134.
Günther, S., et al. (2009). “Dynamics of polyphosphate-accumulating bacteria in wastewater treatment plant microbial communities detected via DAPI (4’,6’-diamidino-2-phenylindole) and tetracycline labeling.” Appl. Environ. Microbiol., 75(7), 2111–2121.
Günther, S., et al. (2012). “Correlation of community dynamics and process parameters as a tool for the prediction of the stability of wastewater treatment.” Environ. Sci. Technol., 46(1), 84–92.
Hantsis-Zacharov, E., and Halpern, M. (2007). “Culturable psychrotrophic bacterial communities in raw milk and their proteolytic and lipolytic traits.” Appl. Environ. Microbiol., 73(22), 7162–7168.
He, S., Gall, D. L., and McMahon, K. D. (2007). “Candidatus Accumulibacter” population structure in enhanced biological phosphorus removal sludges as revealed by polyphosphate kinase genes.” Appl. Environ. Microbiol., 73(18), 5865–5874.
He, S., Gu, A. Z., and McMahon, K. D. (2008). “Progress toward understanding the distribution of Accumulibacter among full-scale enhanced biological phosphorus removal systems.” Microb. Ecol. 55(2), 229–236.
Heuer, H., Krsek, M., Baker, P., Smalla, K., and Wellington, E. M. (1997). “Analysis of actinomycete communities by specific amplification of genes encoding 16S rRNA and gel-electrophoretic separation in denaturing gradients.” Appl. Environ. Microbiol., 63(8), 3233–3241.
Jukes, T. H., and Cantor, C. R. (1969). “Evolution of protein molecules.” mammalian protein metabolism, H. N. Munro, ed., Academic Press, New York, 21–132.
Kong, Y., Nielsen, J. L., and Nielsen, P. H. (2004). “Microautoradiographic study of Rhodocyclus-related polyphosphate-accumulating bacteria in full-scale enhanced biological phosphorus removal plants.” Appl. Environ. Microbiol., 70(9), 5383–5390.
Kong, Y., Nielsen, J. L., and Nielsen, P. H. (2005). “Identity and ecophysiology of uncultured actinobacterial polyphosphate-accumulating organisms in full-scale enhanced biological phosphorus removal plants.” Appl. Environ. Microbiol., 71(7), 4076–4085.
Kong, Y., Xia, Y., Nielsen, J. L., and Nielsen, P. H. (2007). “Structure and function of the microbial community in a full-scale enhanced biological phosphorus removal plant.” Microbiology, 153(12), 4061–4073.
Kong, Y. H., Beer, M., Seviour, R. J., Lindrea, K. C., and Rees, G. A. (2002). “Role of ‘G-bacteria’ in anaerobic substrate uptake in a SBR with no phosphorus removal.” Water Sci. Technol., 46(1–2), 171–178.
Kornberg, A. (1995). “Inorganic polyphosphate: Toward making a forgotten polymer unforgettable.” J. Bacteriol., 177(3), 491–496.
Kragelund, C., Rolighed Thomsen, T., Mielczarek, A. T., and Nielsen, P. H. (2011). “Eikelboom’s morphotype 0803 inactivated sludge belongs to the genus Caldilinea in the phylum Chlorofexi.” FEMS Microbiol. Ecol., 76(3), 451–462.
Kruskal, J. B. (1964). “Multidimensional scaling by optimizing goodness of fit to a nonmetric hypothesis.” Psychometrika, 29(1), 1–27.
Kulaev, I., and Kulakovskaya, T. (2000). “Polyphosphate and phosphate pump.” Annu. Rev. Microbiol., 54, 709–734.
Lane, D. J. (1991). “16 S/23S rRNA sequencing.” Nucleic acid techniques in bacterial systematics, E. Stackbrandt and M. Goodfellow, eds., Wiley, New York, 115–175.
Liu, W. T., Nielsen, A. T., Wu, J. H., Tsai, C. S., Matsuo, Y., and Molin, S. (2001). “In situ identification of polyphosphate- and polyhydroxyalkanoate-accumulating traits for microbial populations in a biological phosphorus removal process.” Environ. Microbiol., 3(2), 110–122.
Loy, A., et al. (2005). “16S rRNA gene-based oligonucleotide microarray for environmental monitoring of the betaproteobacterial order “Rhodocyclales”.” Appl. Environ. Microbiol., 71(3), 1373–1386.
Manz, W., Amann, R., Ludwig, W., Wagner, M., and Schleifer, K. H. (1992). “Phylogenetic oligodeoxynucleotide probes for the major subclasses of Proteobacteria: Problems and solutions.” Syst. Appl. Microbiol., 15(4), 593–600.
McGrath, J. W., and Quinn, J. P. (2000). “Intracellular accumulation of polyphosphate by the yeast Candida humicola G-1 in response to acid pH.” Appl. Environ. Microbiol., 66(9), 4068–4073.
Mino, T., van Loosdrecht, M. C., and Heijnen, J. J. (1998). “Microbiology and biochemistry of enhanced biological phosphorous removal process.” Water Res., 32(11), 3193–3207.
Muyzer, G., de Waal, E. C., and Uitterlinden, A. G. (1993). “Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16S rRNA.” Appl. Environ. Microbiol., 59(3), 695–700.
Neef, A. (1997). “Anwendung der in situ Einzelzell-Identifizierung von Bakterien zur Populationsanalyse in komplexen mikrobiellen Biozönosen.” Ph.D. thesis, Technical Univ. Munich, Germany.
Nercessian, O., Fouquet, Y., Pierre, C., Prieur, D., and Jeanthon, C. (2005). “Diversity of bacteria and archaea associated with a carbonate-rich metalliferous sediment sample from the rainbow vent field on the Mid-Atlantic ridge.” Environ. Microbiol., 7(5), 698–714.
Nielsen, P. H., et al. (2010). “A conceptual ecosystem model of microbial communities in enhanced biological phosphorus removal plants.” Water Res., 44(17), 5070–5088.
Nielsen, P. H., Saunders, A. M., Hansen, A. A., Larsen, P., and Nielsen, J. L. (2012). “Microbial communities involved in enhanced biological phosphorous removal from wastewater—A model system in environmental biotechnology.” Curr. Opin. Biotechnol., 23(3), 452–459.
Oksanen, J. (2010). “Multivariate analysis of ecological communities, R: vegan tutorial.” 〈http://cc.oulu.fi/~jarioksa/opetus/metodi/vegantutor.pdf〉.
Oksanen, J., et al. (2011). “vegan: Community ecology package.” R package version 1.17-7.
R Development Core Team. (2010). R: A language and environment for statistical computing, R Foundation for Statistical Computing, Vienna, Austria.
Röske, K., Sachse, R., Scheerer, C., and Röske, I. (2012). “Microbial diversity and composition of the sediment in the drinking water reservoir Saidenbach (Saxonia, Germany).” Syst. Appl. Microbiol., 35(1), 35–44.
Sabelfeld, M., and Geißen, S. U. (2011). “Verfahren zur Eliminierung und Rückgewinnung von Phosphor aus Abwasser.” Chemie Ingenieur Technik, 83(6), 782–795.
Saitou, N., and Nei, M. (1987). “The neighbor-joining method: A new method for reconstructing phylogenetic trees.” Molec. Biol. Evol., 4(4), 406–425.
Sanapareddy, N., Hamp, T. J., Gonzalez, L. C., Hilger, H. A., Fodor, A. A., and Clinton, S. M. (2009). “Molecular diversity of a North Carolina wastewater treatment plant as revealed by pyrosequencing.” Appl. Environ. Microbiol., 75(6), 1688–1696.
Sander, A., Ruess, M., Bereswill, S., Schuppler, M., and Steinbrueckner, B. (1998). “Comparison of different DNA fingerprinting techniques for molecular typing of Bartonella henselae isolates.” J. Clin. Microbiol., 36(10), 2973–2981.
Schloss, P. D., et al. (2009). “Introducing mothur: Open-source, platform-independent, community-supported software for describing and comparing microbial communities.” Appl. Environ. Microbiol., 75(23), 7537–7541.
Serafim, L. S., Lemos, P. C., Levantesi, C., Tandoi, V., Santos, H., and Reis, M. A. (2002). “Methods for detection and visualization of intracellular polymers stored by polyphosphate-accumulating microorganisms.” J. Microbiol. Methods, 51(1), 1–18.
Seviour, R. J., Mino, T., and Onuki, M. (2003). “The microbiology of biological phosphorus removal in activated sludge systems.” FEMS Microbiol. Rev., 27(1), 99–127.
Tamatani, H., Shoda, M., and Udaka, S. (1983). “Growth and phosphate uptake of a high phosphate accumulating bacterium, Arthrobacter globiformis PAB-6 in continuous culture.” Biotechnol. Bioeng., 25(7), 1781–1788.
Tamura, K., Peterson, D., Peterson, N., Stecher, G., Nei, M., and Kumar, S. (2011). “MEGA5: Molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods.” Molec. Biol. Evol., 28(10), 2731–2739.
Tijssen, J. P., Beekes, H. W., and Van, S. J. (1982). “Localization of polyphosphates in Saccharomyces fragilis, as revealed by 4’,6-diamidino-2-phenylindole fluorescence.” Biochim. Biophys. Acta, 721(4), 394–398.
Wagner, M., et al. (1994). “Development of an rRNA-targeted oligonucleotide probe specific for the genus Acinetobacter and its application for in situ monitoring in activated sludge.” Appl. Environ. Microbiol., 60(3), 792–800.
Wang, Q., Garrity, G. M., Tiedje, J. M., and Cole, J. R. (2007). “Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy.” Appl. Environ. Microbiol., 73(16), 5261–5267.
Wong, M. T., Mino, T., Seviour, R. J., Onuki, M., and Liu, W. T. (2005). “In situ identification and characterization of the microbial community structure of full-scale enhanced biological phosphorous removal plants in Japan.” Water Res., 39(13), 2901–2914.
Wong, M. T., Tan, F. M., Ng, W. J., and Liu, W. T. (2004). “Identification and occurrence of tetrad-forming Alphaproteobacteria in anaerobic-aerobic activated sludge processes.” Microbiology, 150(11), 3741–3748.
Zago, A., Chugani, S., and Chakrabarty, A. M. (1999). “Cloning and characterization of polyphosphate kinase and exopolyphosphatase genes from Pseudomonas aeruginosa 8830.” Appl. Environ. Microbiol., 65(5), 2065–2071.
Zilles, J. L., Peccia, J., Kim, M. W., Hung, C. H., and Noguera, D. R. (2002). “Involvement of Rhodocyclus-related organisms in phosphorus removal in full-scale wastewater treatment plants.” Appl. Environ. Microbiol., 68(6), 2763–2769.

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Go to Journal of Environmental Engineering
Journal of Environmental Engineering
Volume 139Issue 8August 2013
Pages: 1089 - 1098

History

Received: Oct 12, 2012
Accepted: Mar 8, 2013
Published online: Jul 15, 2013
Published in print: Aug 1, 2013
Discussion open until: Dec 15, 2013

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Lysann Mehlig, Ph.D.
Universitätsklinikum Carl Gustav CarusKlinik und Poliklinik für Dermatologie, Fetscherstraße 74, Dresden 01307, Germany.
Mike Petzold [email protected]
Diplom-Biologe, AES Chemunex/bioMeriéux, Zeiloch 20, Bruchsal 76646, Germany. E-mail: [email protected]
Carolin Heder [email protected]
Diplom-Biologe, DKMS Life Science Lab, Fiedlerstr. 34, Dresden 01307, Germany. E-mail: [email protected]
Susanne Günther, Ph.D. [email protected]
Dept. of Environmental Microbiology, UFZ–Helmholtz Centre for Environmental Research, Permoserstraße 15, Leipzig 04318, Germany. E-mail: [email protected]
Susann Müller, Ph.D. [email protected]
Professor, Dept. of Environmental Microbiology, UFZ—Helmholtz Centre for Environmental Research, Permoserstraße 15, Leipzig 04318, Germany. E-mail: [email protected]
Martin Eschenhagen, Ph.D. [email protected]
GVV-Donaueschingen, Im Haberfeld 97, Donaueschingen 78166, Germany. E-mail: [email protected]
Isolde Röske, Ph.D. [email protected]
Professor, Institute of Microbiology, Dresden Univ. of Technology, Dresden 01062, Germany. E-mail: [email protected]
Kerstin Röske, Ph.D. [email protected]
Saxonian Academy of Sciences, Karl-Tauchnitz-Straße 1, Leipzig 04107, Germany (corresponding author). E-mail: [email protected]

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